IL_9ZIU_009

3D structure

PDB id

9ZIU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 16

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

CACAGUGACGGAGCUCUAAG*CUUAGAGGUGGAACGCG

Length

37 nucleotides

Bulged bases

9ZIU|1|A|U|199, 9ZIU|1|A|A|211, 9ZIU|1|A|A|212, 9ZIU|1|A|G|226, 9ZIU|1|A|C|235

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIU|1|A|C|194
9ZIU|1|A|A|195
9ZIU|1|A|C|196
9ZIU|1|A|A|197
9ZIU|1|A|G|198
9ZIU|1|A|U|199
9ZIU|1|A|G|200
9ZIU|1|A|A|201
9ZIU|1|A|C|202
9ZIU|1|A|G|203
9ZIU|1|A|G|204
9ZIU|1|A|A|205
9ZIU|1|A|G|206
9ZIU|1|A|C|207
9ZIU|1|A|U|208
9ZIU|1|A|C|209
9ZIU|1|A|U|210
9ZIU|1|A|A|211
9ZIU|1|A|A|212
9ZIU|1|A|G|213
*
9ZIU|1|A|C|220
9ZIU|1|A|U|221
9ZIU|1|A|U|222
9ZIU|1|A|A|223
9ZIU|1|A|G|224
9ZIU|1|A|A|225
9ZIU|1|A|G|226
9ZIU|1|A|G|227
9ZIU|1|A|U|228
9ZIU|1|A|G|229
9ZIU|1|A|G|230
9ZIU|1|A|A|231
9ZIU|1|A|A|232
9ZIU|1|A|C|233
9ZIU|1|A|G|234
9ZIU|1|A|C|235
9ZIU|1|A|G|236

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains