IL_9ZIW_007

3D structure

PDB id

9ZIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 18

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGAC*GGAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZIW_007 not in the Motif Atlas

Geometric match to IL_9H3G_201

Geometric discrepancy: 0.3304

The information below is about IL_9H3G_201

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15225.4

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

38

Unit IDs

9ZIW|1|A|U|199
9ZIW|1|A|G|200
9ZIW|1|A|A|201
9ZIW|1|A|C|202
*
9ZIW|1|A|G|229
9ZIW|1|A|G|230
9ZIW|1|A|A|231
9ZIW|1|A|A|232

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains