IL_9ZIW_010

3D structure

PDB id

9ZIW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 18

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CGG*CAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZIW_010 not in the Motif Atlas

Geometric match to IL_5UNE_003

Geometric discrepancy: 0.1616

The information below is about IL_5UNE_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9ZIW|1|A|C|313
9ZIW|1|A|G|314
9ZIW|1|A|G|315
*
9ZIW|1|A|C|322
9ZIW|1|A|A|323
9ZIW|1|A|G|324

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains