IL_9ZIY_008

3D structure

PDB id

9ZIY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 21

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAGCUCUAAG*CCUUAGAGGUGGAAC

Length

26 nucleotides

Bulged bases

9ZIY|1|A|G|204, 9ZIY|1|A|C|209, 9ZIY|1|A|A|212, 9ZIY|1|A|G|226, 9ZIY|1|A|G|230, 9ZIY|1|A|A|231

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ZIY|1|A|G|203
9ZIY|1|A|G|204
9ZIY|1|A|A|205
9ZIY|1|A|G|206
9ZIY|1|A|C|207
9ZIY|1|A|U|208
9ZIY|1|A|C|209
9ZIY|1|A|U|210
9ZIY|1|A|A|211
9ZIY|1|A|A|212
9ZIY|1|A|G|213
*
9ZIY|1|A|C|219
9ZIY|1|A|C|220
9ZIY|1|A|U|221
9ZIY|1|A|U|222
9ZIY|1|A|A|223
9ZIY|1|A|G|224
9ZIY|1|A|A|225
9ZIY|1|A|G|226
9ZIY|1|A|G|227
9ZIY|1|A|U|228
9ZIY|1|A|G|229
9ZIY|1|A|G|230
9ZIY|1|A|A|231
9ZIY|1|A|A|232
9ZIY|1|A|C|233

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains