IL_9ZIZ_006

3D structure

PDB id

9ZIZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Geobacillus stearothermophilus RNase P holoenzyme in 1 mM Mg2+, conformer 19

Experimental method

ELECTRON MICROSCOPY

Resolution

3.24 Å

Loop

Sequence

ACG*UAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZIZ_006 not in the Motif Atlas

Geometric match to IL_5D0B_001

Geometric discrepancy: 0.256

The information below is about IL_5D0B_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.6

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

241

Unit IDs

9ZIZ|1|A|A|155
9ZIZ|1|A|C|156
9ZIZ|1|A|G|157
*
9ZIZ|1|A|U|169
9ZIZ|1|A|A|170
9ZIZ|1|A|U|171

Current chains

Chain A

RNase P RNA (417-MER)

Nearby chains