IL_9ZN2_001
3D structure
- PDB id
- 9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9ZN2_001 not in the Motif Atlas
- Homologous match to IL_8B0X_065
- Geometric discrepancy: 0.0674
- The information below is about IL_8B0X_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22311.4
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 12
Unit IDs
9ZN2|1|A|G|24
9ZN2|1|A|U|25
9ZN2|1|A|G|26
9ZN2|1|A|G|27
9ZN2|1|A|A|28
9ZN2|1|A|U|29
9ZN2|1|A|G|30
*
9ZN2|1|A|C|510
9ZN2|1|A|U|511
9ZN2|1|A|G|512
9ZN2|1|A|A|513
9ZN2|1|A|A|514
9ZN2|1|A|A|515
9ZN2|1|A|C|516
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain S
- 50S ribosomal protein L20
- Chain U
- 50S ribosomal protein L22
Coloring options: