IL_9ZN2_007
3D structure
- PDB id
- 9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CCAGUAG*CGAACG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_9ZN2_007 not in the Motif Atlas
- Homologous match to IL_8B0X_071
- Geometric discrepancy: 0.061
- The information below is about IL_8B0X_071
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_02666.4
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
9ZN2|1|A|C|239
9ZN2|1|A|C|240
9ZN2|1|A|A|241
9ZN2|1|A|G|242
9ZN2|1|A|U|243
9ZN2|1|A|A|244
9ZN2|1|A|G|245
*
9ZN2|1|A|C|253
9ZN2|1|A|G|254
9ZN2|1|A|A|255
9ZN2|1|A|A|256
9ZN2|1|A|C|257
9ZN2|1|A|G|258
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 7
- 50S ribosomal protein L35
- Chain N
- 50S ribosomal protein L15
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