3D structure

PDB id
9ZN2 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli 70S ribosome initiation complex bound to IF1 and extended IF2-GDPCP (70S IC*)
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAUUAG*CGACGAUC
Length
14 nucleotides
Bulged bases
9ZN2|1|a|U|244, 9ZN2|1|a|C|280
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9ZN2|1|a|G|242
9ZN2|1|a|A|243
9ZN2|1|a|U|244
9ZN2|1|a|U|245
9ZN2|1|a|A|246
9ZN2|1|a|G|247
*
9ZN2|1|a|C|277
9ZN2|1|a|G|278
9ZN2|1|a|A|279
9ZN2|1|a|C|280
9ZN2|1|a|G|281
9ZN2|1|a|A|282
9ZN2|1|a|U|283
9ZN2|1|a|C|284

Current chains

Chain a
16S Ribosomal RNA

Nearby chains

Chain l
Small ribosomal subunit protein uS12
Chain q
Small ribosomal subunit protein uS17

Coloring options:

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