IL_9ZTL_022

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

GGAGG*CGUUAC

Length

11 nucleotides

Bulged bases

9ZTL|1|A|U|485

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZTL_022 not in the Motif Atlas

Geometric match to IL_8B0X_021

Geometric discrepancy: 0.1021

The information below is about IL_8B0X_021

Detailed Annotation

tWW-tWH-tHS

Broad Annotation

tWW-tWH-tHS

Motif group

IL_82100.1

Basepair signature

cWW-tWW-cSH-tWH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

9ZTL|1|A|G|446
9ZTL|1|A|G|447
9ZTL|1|A|A|448
9ZTL|1|A|G|449
9ZTL|1|A|G|450
*
9ZTL|1|A|C|483
9ZTL|1|A|G|484
9ZTL|1|A|U|485
9ZTL|1|A|U|486
9ZTL|1|A|A|487
9ZTL|1|A|C|488

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

30S ribosomal protein S4

Chain P

30S ribosomal protein S16