IL_9ZTL_120

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZTL_120 not in the Motif Atlas

Homologous match to IL_7A0S_056

Geometric discrepancy: 0.5483

The information below is about IL_7A0S_056

Detailed Annotation

Double sheared with near cWW

Broad Annotation

Double sheared

Motif group

IL_87767.3

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

18

Unit IDs

9ZTL|1|a|U|1474
9ZTL|1|a|G|1475
9ZTL|1|a|U|1476
9ZTL|1|a|A|1477
9ZTL|1|a|G|1478
*
9ZTL|1|a|U|1513
9ZTL|1|a|G|1514
9ZTL|1|a|A|1515
9ZTL|1|a|G|1516
9ZTL|1|a|G|1517

Current chains

Chain a

23s rRNA

Nearby chains