IL_9ZTL_153

3D structure

PDB id

9ZTL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Single Particle Cryo EM Analysis of a Ribosome Nascent Globin Complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.91 Å

Loop

Sequence

(PSU)GA*UG

Length

5 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_9ZTL_153 not in the Motif Atlas

Homologous match to IL_7A0S_085

Geometric discrepancy: 0.2362

The information below is about IL_7A0S_085

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.9

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

44

Unit IDs

9ZTL|1|a|PSU|2457
9ZTL|1|a|G|2458
9ZTL|1|a|A|2459
*
9ZTL|1|a|U|2493
9ZTL|1|a|G|2494

Current chains

Chain a

23s rRNA

Nearby chains

Chain l

50S ribosomal protein L16