J10_3JAN_001
3D structure
- PDB id
- _3JA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Experimental method
- Resolution
Loop
- Sequence
- GACGUGGCGACCCG*CGGAGGAGAAGAAAC*GGAUU*AAGAG*CUAAAUAC*GUCGAUGAAGAAC*GAGAAUUAA*UCGACACUUCGAACG*CG*UACGCC
- Length
- 92 nucleotides
- Bulged bases
- 3JAN|1|5|A|66, 3JAN|1|8|U|34, 3JAN|1|8|U|38, 3JAN|1|8|A|62, 3JAN|1|8|U|63, 3JAN|1|8|G|94
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
3JAN|1|5|G|16
3JAN|1|5|A|17
3JAN|1|5|C|18
3JAN|1|5|G|19
3JAN|1|5|U|20
3JAN|1|5|G|21
3JAN|1|5|G|22
3JAN|1|5|C|23
3JAN|1|5|G|24
3JAN|1|5|A|25
3JAN|1|5|C|26
3JAN|1|5|C|27
3JAN|1|5|C|28
3JAN|1|5|G|29
*
3JAN|1|5|C|53
3JAN|1|5|G|54
3JAN|1|5|G|55
3JAN|1|5|A|56
3JAN|1|5|G|57
3JAN|1|5|G|58
3JAN|1|5|A|59
3JAN|1|5|G|60
3JAN|1|5|A|61
3JAN|1|5|A|62
3JAN|1|5|G|63
3JAN|1|5|A|64
3JAN|1|5|A|65
3JAN|1|5|A|66
3JAN|1|5|C|67
*
3JAN|1|5|G|74
3JAN|1|5|G|75
3JAN|1|5|A|76
3JAN|1|5|U|77
3JAN|1|5|U|78
*
3JAN|1|5|A|105
3JAN|1|5|A|106
3JAN|1|5|G|107
3JAN|1|5|A|108
3JAN|1|5|G|109
*
3JAN|1|5|C|332
3JAN|1|5|U|333
3JAN|1|5|A|334
3JAN|1|5|A|335
3JAN|1|5|A|336
3JAN|1|5|U|337
3JAN|1|5|A|338
3JAN|1|5|C|339
*
3JAN|1|8|G|33
3JAN|1|8|U|34
3JAN|1|8|C|35
3JAN|1|8|G|36
3JAN|1|8|A|37
3JAN|1|8|U|38
3JAN|1|8|G|39
3JAN|1|8|A|40
3JAN|1|8|A|41
3JAN|1|8|G|42
3JAN|1|8|A|43
3JAN|1|8|A|44
3JAN|1|8|C|45
*
3JAN|1|8|G|58
3JAN|1|8|A|59
3JAN|1|8|G|60
3JAN|1|8|A|61
3JAN|1|8|A|62
3JAN|1|8|U|63
3JAN|1|8|U|64
3JAN|1|8|A|65
3JAN|1|8|A|66
*
3JAN|1|8|U|92
3JAN|1|8|C|93
3JAN|1|8|G|94
3JAN|1|8|A|95
3JAN|1|8|C|96
3JAN|1|8|A|97
3JAN|1|8|C|98
3JAN|1|8|U|99
3JAN|1|8|U|100
3JAN|1|8|C|101
3JAN|1|8|G|102
3JAN|1|8|A|103
3JAN|1|8|A|104
3JAN|1|8|C|105
3JAN|1|8|G|106
*
3JAN|1|8|C|113
3JAN|1|8|G|114
*
3JAN|1|8|U|136
3JAN|1|8|A|137
3JAN|1|8|C|138
3JAN|1|8|G|139
3JAN|1|8|C|140
3JAN|1|8|C|141
Current chains
- Chain 5
- 28S ribosomal RNA
- Chain 8
- 5.8S ribosomal RNA
Nearby chains
- Chain L
- Ribosomal protein eL13
- Chain N
- Ribosomal protein eL15
- Chain X
- Ribosomal protein uL23
- Chain Y
- Ribosomal protein uL24
- Chain h
- Ribosomal protein uL29
- Chain i
- Ribosomal protein eL36
- Chain j
- Ribosomal protein eL37
- Chain l
- Ribosomal protein eL39
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