J10_4WWW_001
3D structure
- PDB id
- _4WW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Experimental method
- Resolution
Loop
- Sequence
- CGACUAAG*UACAAGCAG*CGUACCU*AUGGG*CA*UGAACUC*GUAC*GCGCUG*CC*GG
- Length
- 52 nucleotides
- Bulged bases
- 4WWW|1|YA|U|562, 4WWW|1|YA|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4WWW|1|YA|C|8
4WWW|1|YA|G|9
4WWW|1|YA|A|10
4WWW|1|YA|C|11
4WWW|1|YA|U|12
4WWW|1|YA|A|13
4WWW|1|YA|A|14
4WWW|1|YA|G|15
*
4WWW|1|YA|U|525
4WWW|1|YA|A|526
4WWW|1|YA|C|527
4WWW|1|YA|A|528
4WWW|1|YA|A|529
4WWW|1|YA|G|530
4WWW|1|YA|C|531
4WWW|1|YA|A|532
4WWW|1|YA|G|533
*
4WWW|1|YA|C|560
4WWW|1|YA|G|561
4WWW|1|YA|U|562
4WWW|1|YA|A|563
4WWW|1|YA|C|564
4WWW|1|YA|C|565
4WWW|1|YA|U|566
*
4WWW|1|YA|A|575
4WWW|1|YA|U|576
4WWW|1|YA|G|577
4WWW|1|YA|G|578
4WWW|1|YA|G|579
*
4WWW|1|YA|C|1261
4WWW|1|YA|A|1262
*
4WWW|1|YA|U|2017
4WWW|1|YA|G|2018
4WWW|1|YA|A|2019
4WWW|1|YA|A|2020
4WWW|1|YA|C|2021
4WWW|1|YA|U|2022
4WWW|1|YA|C|2023
*
4WWW|1|YA|G|2040
4WWW|1|YA|U|2041
4WWW|1|YA|A|2042
4WWW|1|YA|C|2043
*
4WWW|1|YA|G|2625
4WWW|1|YA|C|2626
4WWW|1|YA|G|2627
4WWW|1|YA|C|2628
4WWW|1|YA|U|2629
4WWW|1|YA|G|2630
*
4WWW|1|YA|C|2788
4WWW|1|YA|C|2789
*
4WWW|1|YA|G|2894
4WWW|1|YA|G|2895
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain Y0
- 50S ribosomal protein L32
- Chain YD
- 50S ribosomal protein L3
- Chain YE
- 50S ribosomal protein L4
- Chain YJ
- 50S ribosomal protein L13
- Chain YL
- 50S ribosomal protein L15
- Chain YQ
- 50S ribosomal protein L20
- Chain YR
- 50S ribosomal protein L21
- Chain YS
- 50S ribosomal protein L22
Coloring options: