Loop J10_5NG8

3D structure

PDB id: _5NG (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence: UUAUUAAG*UACAAGUAG*CGUGC*GAA*UG*CAUAGUA*UUAC*GCGUAG*CC*GA
Length: 48 nucleotides
Bulged bases: 5NG8|1|BA|G|575
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

5NG8|1|BA|U|8
5NG8|1|BA|U|9
5NG8|1|BA|A|10
5NG8|1|BA|U|11
5NG8|1|BA|U|12
5NG8|1|BA|A|13
5NG8|1|BA|A|14
5NG8|1|BA|G|15
*
5NG8|1|BA|U|570
5NG8|1|BA|A|571
5NG8|1|BA|C|572
5NG8|1|BA|A|573
5NG8|1|BA|A|574
5NG8|1|BA|G|575
5NG8|1|BA|U|576
5NG8|1|BA|A|577
5NG8|1|BA|G|578
*
5NG8|1|BA|C|603
5NG8|1|BA|G|604
5NG8|1|BA|U|605
5NG8|1|BA|G|606
5NG8|1|BA|C|607
*
5NG8|1|BA|G|620
5NG8|1|BA|A|621
5NG8|1|BA|A|622
*
5NG8|1|BA|U|1299
5NG8|1|BA|G|1300
*
5NG8|1|BA|C|2044
5NG8|1|BA|A|2045
5NG8|1|BA|U|2046
5NG8|1|BA|A|2047
5NG8|1|BA|G|2048
5NG8|1|BA|U|2049
5NG8|1|BA|A|2050
*
5NG8|1|BA|U|2067
5NG8|1|BA|U|2068
5NG8|1|BA|A|2069
5NG8|1|BA|C|2070
*
5NG8|1|BA|G|2652
5NG8|1|BA|C|2653
5NG8|1|BA|G|2654
5NG8|1|BA|U|2655
5NG8|1|BA|A|2656
5NG8|1|BA|G|2657
*
5NG8|1|BA|C|2815
5NG8|1|BA|C|2816
*
5NG8|1|BA|G|2913
5NG8|1|BA|A|2914

Current chains

Chain BA: 23S ribosomal RNA

Nearby chains

Chain BD: 50S ribosomal protein L3
Chain BE: 50S ribosomal protein L4
Chain BH: 50S ribosomal protein L13
Chain BO: 50S ribosomal protein L20
Chain BP: 50S ribosomal protein L21
Chain BQ: 50S ribosomal protein L22
Chain BZ: 50S ribosomal protein L32

J10_5NG8_002