J10_5OT7_001
3D structure
- PDB id
- _5OT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Experimental method
- Resolution
Loop
- Sequence
- GAUGGUAAG*UACAAGCAG*CGUGC*GAG*CA*UGAACUG*CUAC*GCGCAG*CCACGGCGUCAAGCCGGUAAG*CGAGGUC
- Length
- 73 nucleotides
- Bulged bases
- 5OT7|1|4|U|9, 5OT7|1|4|U|562, 5OT7|1|4|A|2790, 5OT7|1|4|U|2796, 5OT7|1|4|A|2801|||A, 5OT7|1|4|G|2802
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5OT7|1|4|G|7
5OT7|1|4|A|8
5OT7|1|4|U|9
5OT7|1|4|G|10
5OT7|1|4|G|11
5OT7|1|4|U|12
5OT7|1|4|A|13
5OT7|1|4|A|14
5OT7|1|4|G|15
*
5OT7|1|4|U|525
5OT7|1|4|A|526
5OT7|1|4|C|527
5OT7|1|4|A|528
5OT7|1|4|A|529
5OT7|1|4|G|530
5OT7|1|4|C|531
5OT7|1|4|A|532
5OT7|1|4|G|533
*
5OT7|1|4|C|560
5OT7|1|4|G|561
5OT7|1|4|U|562
5OT7|1|4|G|563
5OT7|1|4|C|564
*
5OT7|1|4|G|577
5OT7|1|4|A|578
5OT7|1|4|G|579
*
5OT7|1|4|C|1261
5OT7|1|4|A|1262
*
5OT7|1|4|U|2017
5OT7|1|4|G|2018
5OT7|1|4|A|2019
5OT7|1|4|A|2020
5OT7|1|4|C|2021
5OT7|1|4|U|2022
5OT7|1|4|G|2023
*
5OT7|1|4|C|2040
5OT7|1|4|U|2041
5OT7|1|4|A|2042
5OT7|1|4|C|2043
*
5OT7|1|4|G|2625
5OT7|1|4|C|2626
5OT7|1|4|G|2627
5OT7|1|4|C|2628
5OT7|1|4|A|2629
5OT7|1|4|G|2630
*
5OT7|1|4|C|2788
5OT7|1|4|C|2789
5OT7|1|4|A|2790
5OT7|1|4|C|2791
5OT7|1|4|G|2792
5OT7|1|4|G|2793
5OT7|1|4|C|2794
5OT7|1|4|G|2795
5OT7|1|4|U|2796
5OT7|1|4|C|2799
5OT7|1|4|A|2801
5OT7|1|4|A|2801|||A
5OT7|1|4|G|2802
5OT7|1|4|C|2803
5OT7|1|4|C|2804
5OT7|1|4|G|2805
5OT7|1|4|G|2807
5OT7|1|4|U|2808
5OT7|1|4|A|2809
5OT7|1|4|A|2810
5OT7|1|4|G|2811
*
5OT7|1|4|C|2889
5OT7|1|4|G|2891
5OT7|1|4|A|2892
5OT7|1|4|G|2893
5OT7|1|4|G|2894
5OT7|1|4|U|2895
5OT7|1|4|C|2896
Current chains
- Chain 4
- 23S Ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L32
- Chain h
- 50S ribosomal protein L3
- Chain i
- 50S ribosomal protein L4
- Chain o
- 50S ribosomal protein L13
- Chain v
- 50S ribosomal protein L20
- Chain w
- 50S ribosomal protein L21
- Chain x
- 50S ribosomal protein L22
Coloring options: