J10_5T7V_001
3D structure
- PDB id
- _5T7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Experimental method
- Resolution
Loop
- Sequence
- GCCGAUGAAGGAC*GAUAUGCU*AGAUUUCCGAAUG*CAG*UUAU*AAGGCACAC*GGAAGAGAAAGA*UCGAUU*AAGAG*CUAAAUAC
- Length
- 81 nucleotides
- Bulged bases
- 5T7V|1|B|U|50, 5T7V|1|B|U|72, 5T7V|1|B|U|74, 5T7V|1|B|C|184, 5T7V|1|B|A|226
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5T7V|1|B|G|45
5T7V|1|B|C|46
5T7V|1|B|C|47
5T7V|1|B|G|48
5T7V|1|B|A|49
5T7V|1|B|U|50
5T7V|1|B|G|51
5T7V|1|B|A|52
5T7V|1|B|A|53
5T7V|1|B|G|54
5T7V|1|B|G|55
5T7V|1|B|A|56
5T7V|1|B|C|57
*
5T7V|1|B|G|70
5T7V|1|B|A|71
5T7V|1|B|U|72
5T7V|1|B|A|73
5T7V|1|B|U|74
5T7V|1|B|G|75
5T7V|1|B|C|76
5T7V|1|B|U|77
*
5T7V|1|B|A|108
5T7V|1|B|G|109
5T7V|1|B|A|110
5T7V|1|B|U|111
5T7V|1|B|U|112
5T7V|1|B|U|113
5T7V|1|B|C|114
5T7V|1|B|C|115
5T7V|1|B|G|116
5T7V|1|B|A|117
5T7V|1|B|A|118
5T7V|1|B|U|119
5T7V|1|B|G|120
*
5T7V|1|B|C|129
5T7V|1|B|A|130
5T7V|1|B|G|131
*
5T7V|1|B|U|148
5T7V|1|B|U|149
5T7V|1|B|A|150
5T7V|1|B|U|151
*
5T7V|1|B|A|178
5T7V|1|B|A|179
5T7V|1|B|G|180
5T7V|1|B|G|181
5T7V|1|B|C|182
5T7V|1|B|A|183
5T7V|1|B|C|184
5T7V|1|B|A|185
5T7V|1|B|C|186
*
5T7V|1|B|G|217
5T7V|1|B|G|218
5T7V|1|B|A|219
5T7V|1|B|A|220
5T7V|1|B|G|221
5T7V|1|B|A|222
5T7V|1|B|G|223
5T7V|1|B|A|224
5T7V|1|B|A|225
5T7V|1|B|A|226
5T7V|1|B|G|227
5T7V|1|B|A|228
*
5T7V|1|B|U|233
5T7V|1|B|C|234
5T7V|1|B|G|235
5T7V|1|B|A|236
5T7V|1|B|U|237
5T7V|1|B|U|238
*
5T7V|1|B|A|265
5T7V|1|B|A|266
5T7V|1|B|G|267
5T7V|1|B|A|268
5T7V|1|B|G|269
*
5T7V|1|B|C|472
5T7V|1|B|U|473
5T7V|1|B|A|474
5T7V|1|B|A|475
5T7V|1|B|A|476
5T7V|1|B|U|477
5T7V|1|B|A|478
5T7V|1|B|C|479
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain L6
- 50S ribosomal protein L23
- Chain LB
- 50S ribosomal protein L29
- Chain LG
- 50S ribosomal protein L34
Coloring options: