J10_6GZZ_001
3D structure
- PDB id
- _6GZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Experimental method
- Resolution
Loop
- Sequence
- CAGUC*GCGUGCCU*AUGAGCCGGCGACUCACGGUCGUGG*CGCGGCCGUGGACCCGAAACC*GGAGAUAGCUGGUUC*GC*GCGAAUGCCGGCAUGAGUAACGAUAAA*UC*GCGC*GGUGAAAUUG
- Length
- 119 nucleotides
- Bulged bases
- 6GZZ|1|A1|A|559, 6GZZ|1|A1|U|587, 6GZZ|1|A1|C|722, 6GZZ|1|A1|G|854, 6GZZ|1|A1|U|1303, 6GZZ|1|A1|G|1319, 6GZZ|1|A1|A|1320, 6GZZ|1|A1|U|1321, 6GZZ|1|A1|A|1322, 6GZZ|1|A1|A|1323, 6GZZ|1|A1|C|1695, 6GZZ|1|A1|G|1696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6GZZ|1|A1|C|558
6GZZ|1|A1|A|559
6GZZ|1|A1|G|560
6GZZ|1|A1|U|561
6GZZ|1|A1|C|562
*
6GZZ|1|A1|G|584
6GZZ|1|A1|C|585
6GZZ|1|A1|G|586
6GZZ|1|A1|U|587
6GZZ|1|A1|G|588
6GZZ|1|A1|C|589
6GZZ|1|A1|C|590
6GZZ|1|A1|U|591
*
6GZZ|1|A1|A|600
6GZZ|1|A1|U|601
6GZZ|1|A1|G|602
6GZZ|1|A1|A|603
6GZZ|1|A1|G|604
6GZZ|1|A1|C|605
6GZZ|1|A1|C|606
6GZZ|1|A1|G|607
6GZZ|1|A1|G|608
6GZZ|1|A1|C|609
6GZZ|1|A1|G|610
6GZZ|1|A1|A|611
6GZZ|1|A1|C|612
6GZZ|1|A1|U|613
6GZZ|1|A1|C|614
6GZZ|1|A1|A|615
6GZZ|1|A1|C|616
6GZZ|1|A1|G|617
6GZZ|1|A1|G|618
6GZZ|1|A1|U|619
6GZZ|1|A1|C|620
6GZZ|1|A1|G|621
6GZZ|1|A1|U|622
6GZZ|1|A1|G|623
6GZZ|1|A1|G|624
*
6GZZ|1|A1|C|708
6GZZ|1|A1|G|709
6GZZ|1|A1|C|710
6GZZ|1|A1|G|711
6GZZ|1|A1|G|712
6GZZ|1|A1|C|713
6GZZ|1|A1|C|714
6GZZ|1|A1|G|715
6GZZ|1|A1|U|716
6GZZ|1|A1|G|717
6GZZ|1|A1|G|718
6GZZ|1|A1|A|719
6GZZ|1|A1|C|720
6GZZ|1|A1|C|721
6GZZ|1|A1|C|722
6GZZ|1|A1|G|723
6GZZ|1|A1|A|724
6GZZ|1|A1|A|725
6GZZ|1|A1|A|726
6GZZ|1|A1|C|727
6GZZ|1|A1|C|728
*
6GZZ|1|A1|G|847
6GZZ|1|A1|G|848
6GZZ|1|A1|A|849
6GZZ|1|A1|G|850
6GZZ|1|A1|A|851
6GZZ|1|A1|U|852
6GZZ|1|A1|A|853
6GZZ|1|A1|G|854
6GZZ|1|A1|C|855
6GZZ|1|A1|U|856
6GZZ|1|A1|G|857
6GZZ|1|A1|G|858
6GZZ|1|A1|U|859
6GZZ|1|A1|U|860
6GZZ|1|A1|C|861
*
6GZZ|1|A1|G|1242
6GZZ|1|A1|C|1243
*
6GZZ|1|A1|G|1298
6GZZ|1|A1|C|1299
6GZZ|1|A1|G|1300
6GZZ|1|A1|A|1301
6GZZ|1|A1|A|1302
6GZZ|1|A1|U|1303
6GZZ|1|A1|G|1304
6GZZ|1|A1|C|1305
6GZZ|1|A1|C|1306
6GZZ|1|A1|G|1307
6GZZ|1|A1|G|1308
6GZZ|1|A1|C|1309
6GZZ|1|A1|A|1310
6GZZ|1|A1|U|1311
6GZZ|1|A1|G|1312
6GZZ|1|A1|A|1313
6GZZ|1|A1|G|1314
6GZZ|1|A1|U|1315
6GZZ|1|A1|A|1316
6GZZ|1|A1|A|1317
6GZZ|1|A1|C|1318
6GZZ|1|A1|G|1319
6GZZ|1|A1|A|1320
6GZZ|1|A1|U|1321
6GZZ|1|A1|A|1322
6GZZ|1|A1|A|1323
6GZZ|1|A1|A|1324
*
6GZZ|1|A1|U|1342
6GZZ|1|A1|C|1343
*
6GZZ|1|A1|G|1694
6GZZ|1|A1|C|1695
6GZZ|1|A1|G|1696
6GZZ|1|A1|C|1697
*
6GZZ|1|A1|G|2033
6GZZ|1|A1|G|2034
6GZZ|1|A1|U|2035
6GZZ|1|A1|G|2036
6GZZ|1|A1|A|2037
6GZZ|1|A1|A|2038
6GZZ|1|A1|A|2039
6GZZ|1|A1|U|2040
6GZZ|1|A1|U|2041
6GZZ|1|A1|G|2042
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain D1
- 50S ribosomal protein L3
- Chain E1
- 50S ribosomal protein L4
- Chain I1
- 50S ribosomal protein L13
- Chain K1
- 50S ribosomal protein L15
- Chain M1
- 50S ribosomal protein L17
- Chain P1
- 50S ribosomal protein L20
- Chain Q1
- 50S ribosomal protein L21
- Chain R1
- 50S ribosomal protein L22
- Chain a1
- 50S ribosomal protein L32
- Chain c1
- 50S ribosomal protein L34
- Chain d1
- 50S ribosomal protein L35
Coloring options: