Loop J10_6S13

3D structure

PDB id: _6S1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence: UAAGUUAUUAAG*UACAAGUAG*CGUGC*GAA*UG*CAUAGUA*UUAC*GCGUAG*CC*GACUUA
Length: 56 nucleotides
Bulged bases: 6S13|1|A|G|575
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6S13|1|A|U|4
6S13|1|A|A|5
6S13|1|A|A|6
6S13|1|A|G|7
6S13|1|A|U|8
6S13|1|A|U|9
6S13|1|A|A|10
6S13|1|A|U|11
6S13|1|A|U|12
6S13|1|A|A|13
6S13|1|A|A|14
6S13|1|A|G|15
*
6S13|1|A|U|570
6S13|1|A|A|571
6S13|1|A|C|572
6S13|1|A|A|573
6S13|1|A|A|574
6S13|1|A|G|575
6S13|1|A|U|576
6S13|1|A|A|577
6S13|1|A|G|578
*
6S13|1|A|C|603
6S13|1|A|G|604
6S13|1|A|U|605
6S13|1|A|G|606
6S13|1|A|C|607
*
6S13|1|A|G|620
6S13|1|A|A|621
6S13|1|A|A|622
*
6S13|1|A|U|1299
6S13|1|A|G|1300
*
6S13|1|A|C|2044
6S13|1|A|A|2045
6S13|1|A|U|2046
6S13|1|A|A|2047
6S13|1|A|G|2048
6S13|1|A|U|2049
6S13|1|A|A|2050
*
6S13|1|A|U|2067
6S13|1|A|U|2068
6S13|1|A|A|2069
6S13|1|A|C|2070
*
6S13|1|A|G|2652
6S13|1|A|C|2653
6S13|1|A|G|2654
6S13|1|A|U|2655
6S13|1|A|A|2656
6S13|1|A|G|2657
*
6S13|1|A|C|2815
6S13|1|A|C|2816
*
6S13|1|A|G|2913
6S13|1|A|A|2914
6S13|1|A|C|2915
6S13|1|A|U|2916
6S13|1|A|U|2917
6S13|1|A|A|2918

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain D: 50S ribosomal protein L3
Chain E: 50S ribosomal protein L4
Chain H: 50S ribosomal protein L13
Chain O: 50S ribosomal protein L20
Chain P: 50S ribosomal protein L21
Chain Q: 50S ribosomal protein L22
Chain Z: 50S ribosomal protein L32

J10_6S13_001