3D structure

PDB id
_7AS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence
AAGUUAUUAAG*UACAAGUAG*CGUGC*GAA*UG*CAUAGUA*UUAC*GCGUAG*CCAACUUCGGUUAUAAG*UCGAACU
Length
71 nucleotides
Bulged bases
7ASN|1|A|G|575, 7ASN|1|A|U|605, 7ASN|1|A|A|2817, 7ASN|1|A|U|2821, 7ASN|1|A|A|2914
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ASN|1|A|A|5
7ASN|1|A|A|6
7ASN|1|A|G|7
7ASN|1|A|U|8
7ASN|1|A|U|9
7ASN|1|A|A|10
7ASN|1|A|U|11
7ASN|1|A|U|12
7ASN|1|A|A|13
7ASN|1|A|A|14
7ASN|1|A|G|15
*
7ASN|1|A|U|570
7ASN|1|A|A|571
7ASN|1|A|C|572
7ASN|1|A|A|573
7ASN|1|A|A|574
7ASN|1|A|G|575
7ASN|1|A|U|576
7ASN|1|A|A|577
7ASN|1|A|G|578
*
7ASN|1|A|C|603
7ASN|1|A|G|604
7ASN|1|A|U|605
7ASN|1|A|G|606
7ASN|1|A|C|607
*
7ASN|1|A|G|620
7ASN|1|A|A|621
7ASN|1|A|A|622
*
7ASN|1|A|U|1299
7ASN|1|A|G|1300
*
7ASN|1|A|C|2044
7ASN|1|A|A|2045
7ASN|1|A|U|2046
7ASN|1|A|A|2047
7ASN|1|A|G|2048
7ASN|1|A|U|2049
7ASN|1|A|A|2050
*
7ASN|1|A|U|2067
7ASN|1|A|U|2068
7ASN|1|A|A|2069
7ASN|1|A|C|2070
*
7ASN|1|A|G|2652
7ASN|1|A|C|2653
7ASN|1|A|G|2654
7ASN|1|A|U|2655
7ASN|1|A|A|2656
7ASN|1|A|G|2657
*
7ASN|1|A|C|2815
7ASN|1|A|C|2816
7ASN|1|A|A|2817
7ASN|1|A|A|2818
7ASN|1|A|C|2819
7ASN|1|A|U|2820
7ASN|1|A|U|2821
7ASN|1|A|C|2822
7ASN|1|A|G|2823
7ASN|1|A|G|2824
7ASN|1|A|U|2825
7ASN|1|A|U|2826
7ASN|1|A|A|2827
7ASN|1|A|U|2828
7ASN|1|A|A|2829
7ASN|1|A|A|2830
7ASN|1|A|G|2831
*
7ASN|1|A|U|2908
7ASN|1|A|C|2909
7ASN|1|A|G|2910
7ASN|1|A|A|2911
7ASN|1|A|A|2914
7ASN|1|A|C|2915
7ASN|1|A|U|2916

Current chains

Chain A
23S

Nearby chains

Chain D
50S ribosomal protein L3
Chain E
50S ribosomal protein L4
Chain H
50S ribosomal protein L13
Chain O
50S ribosomal protein L20
Chain P
50S ribosomal protein L21
Chain Q
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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