3D structure

PDB id
_7AS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence
CGAGUU*AGAC*GGUUCUCUCCGAAAU*AG*UCAG*CGAAAG*CAGACC*GAUU*AUGGUAGGAGAGC*GAGAAUG
Length
67 nucleotides
Bulged bases
7ASP|1|Y|G|863, 7ASP|1|Y|A|989, 7ASP|1|Y|U|1293
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7ASP|1|Y|C|627
7ASP|1|Y|G|628
7ASP|1|Y|A|629
7ASP|1|Y|G|630
7ASP|1|Y|U|631
7ASP|1|Y|U|632
*
7ASP|1|Y|A|713
7ASP|1|Y|G|714
7ASP|1|Y|A|715
7ASP|1|Y|C|716
*
7ASP|1|Y|G|853
7ASP|1|Y|G|854
7ASP|1|Y|U|855
7ASP|1|Y|U|856
7ASP|1|Y|C|857
7ASP|1|Y|U|858
7ASP|1|Y|C|859
7ASP|1|Y|U|860
7ASP|1|Y|C|861
7ASP|1|Y|C|862
7ASP|1|Y|G|863
7ASP|1|Y|A|864
7ASP|1|Y|A|865
7ASP|1|Y|A|866
7ASP|1|Y|U|867
*
7ASP|1|Y|A|880
7ASP|1|Y|G|881
*
7ASP|1|Y|U|987
7ASP|1|Y|C|988
7ASP|1|Y|A|989
7ASP|1|Y|G|990
*
7ASP|1|Y|C|1015
7ASP|1|Y|G|1016
7ASP|1|Y|A|1017
7ASP|1|Y|A|1018
7ASP|1|Y|A|1019
7ASP|1|Y|G|1020
*
7ASP|1|Y|C|1031
7ASP|1|Y|A|1032
7ASP|1|Y|G|1033
7ASP|1|Y|A|1034
7ASP|1|Y|C|1035
7ASP|1|Y|C|1036
*
7ASP|1|Y|G|1207
7ASP|1|Y|A|1208
7ASP|1|Y|U|1209
7ASP|1|Y|U|1210
*
7ASP|1|Y|A|1223
7ASP|1|Y|U|1224
7ASP|1|Y|G|1225
7ASP|1|Y|G|1226
7ASP|1|Y|U|1227
7ASP|1|Y|A|1228
7ASP|1|Y|G|1229
7ASP|1|Y|G|1230
7ASP|1|Y|A|1231
7ASP|1|Y|G|1232
7ASP|1|Y|A|1233
7ASP|1|Y|G|1234
7ASP|1|Y|C|1235
*
7ASP|1|Y|G|1288
7ASP|1|Y|A|1289
7ASP|1|Y|G|1290
7ASP|1|Y|A|1291
7ASP|1|Y|A|1292
7ASP|1|Y|U|1293
7ASP|1|Y|G|1294

Current chains

Chain Y
23S rRNA

Nearby chains

Chain 1
50S ribosomal protein L33,50S ribosomal protein L30
Chain 2
50S ribosomal protein L35
Chain 3
5S ribosomal RNA; 5S rRNA
Chain E
50S ribosomal protein L4
Chain J
50S ribosomal protein L15
Chain O
50S ribosomal protein L20
Chain P
50S ribosomal protein L21

Coloring options:

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