Loop J10_7S9U

3D structure

PDB id: _7S9 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence: UUAGAAAG*UACAAGUAG*CGUGC*GAA*UA*UAUAGUA*UUAC*GCGCAG*CC*GA
Length: 48 nucleotides
Bulged bases: 7S9U|1|A|U|606
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7S9U|1|A|U|8
7S9U|1|A|U|9
7S9U|1|A|A|10
7S9U|1|A|G|11
7S9U|1|A|A|12
7S9U|1|A|A|13
7S9U|1|A|A|14
7S9U|1|A|G|15
*
7S9U|1|A|U|571
7S9U|1|A|A|572
7S9U|1|A|C|573
7S9U|1|A|A|574
7S9U|1|A|A|575
7S9U|1|A|G|576
7S9U|1|A|U|577
7S9U|1|A|A|578
7S9U|1|A|G|579
*
7S9U|1|A|C|604
7S9U|1|A|G|605
7S9U|1|A|U|606
7S9U|1|A|G|607
7S9U|1|A|C|608
*
7S9U|1|A|G|621
7S9U|1|A|A|622
7S9U|1|A|A|623
*
7S9U|1|A|U|1301
7S9U|1|A|A|1302
*
7S9U|1|A|U|2046
7S9U|1|A|A|2047
7S9U|1|A|U|2048
7S9U|1|A|A|2049
7S9U|1|A|G|2050
7S9U|1|A|U|2051
7S9U|1|A|A|2052
*
7S9U|1|A|U|2069
7S9U|1|A|U|2070
7S9U|1|A|A|2071
7S9U|1|A|C|2072
*
7S9U|1|A|G|2654
7S9U|1|A|C|2655
7S9U|1|A|G|2656
7S9U|1|A|C|2657
7S9U|1|A|A|2658
7S9U|1|A|G|2659
*
7S9U|1|A|C|2817
7S9U|1|A|C|2818
*
7S9U|1|A|G|2918
7S9U|1|A|A|2919

Current chains

Chain A: RNA (2436-MER)

Nearby chains

Chain D: 50S ribosomal protein L3
Chain E: 50S ribosomal protein L4
Chain J: 50S ribosomal protein L13
Chain Q: 50S ribosomal protein L20
Chain R: 50S ribosomal protein L21
Chain S: 50S ribosomal protein L22
Chain b: 50S ribosomal protein L32

J10_7S9U_001