J10_8BGH_001

3D structure

PDB id

_8BG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Experimental method

Resolution

Loop

Sequence

CGACUAAG*UACAAGCAG*CGUAC*GGG*CA*UGAACUC*GUAC*GCGCUG*CC*GG

Length

48 nucleotides

Bulged bases

8BGH|1|0|U|562

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BGH|1|0|C|8
8BGH|1|0|G|9
8BGH|1|0|A|10
8BGH|1|0|C|11
8BGH|1|0|U|12
8BGH|1|0|A|13
8BGH|1|0|A|14
8BGH|1|0|G|15
*
8BGH|1|0|U|525
8BGH|1|0|A|526
8BGH|1|0|C|527
8BGH|1|0|A|528
8BGH|1|0|A|529
8BGH|1|0|G|530
8BGH|1|0|C|531
8BGH|1|0|A|532
8BGH|1|0|G|533
*
8BGH|1|0|C|560
8BGH|1|0|G|561
8BGH|1|0|U|562
8BGH|1|0|A|563
8BGH|1|0|C|564
*
8BGH|1|0|G|577
8BGH|1|0|G|578
8BGH|1|0|G|579
*
8BGH|1|0|C|1261
8BGH|1|0|A|1262
*
8BGH|1|0|U|2017
8BGH|1|0|G|2018
8BGH|1|0|A|2019
8BGH|1|0|A|2020
8BGH|1|0|C|2021
8BGH|1|0|U|2022
8BGH|1|0|C|2023
*
8BGH|1|0|G|2040
8BGH|1|0|U|2041
8BGH|1|0|A|2042
8BGH|1|0|C|2043
*
8BGH|1|0|G|2625
8BGH|1|0|C|2626
8BGH|1|0|G|2627
8BGH|1|0|C|2628
8BGH|1|0|U|2629
8BGH|1|0|G|2630
*
8BGH|1|0|C|2788
8BGH|1|0|C|2789
*
8BGH|1|0|G|2894
8BGH|1|0|G|2895

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain G

50S ribosomal protein L13

Chain N

50S ribosomal protein L20

Chain O

50S ribosomal protein L21

Chain P

50S ribosomal protein L22

Chain a

50S ribosomal protein L32