J10_8BHJ_001

3D structure

PDB id

_8BH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Experimental method

Resolution

Loop

Sequence

CGACUAAG*UACAAGCAG*CGUAC*GGG*CA*UGAACUC*GUAC*GCGCUGG*CCC*GG

Length

50 nucleotides

Bulged bases

8BHJ|1|0|U|562

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BHJ|1|0|C|8
8BHJ|1|0|G|9
8BHJ|1|0|A|10
8BHJ|1|0|C|11
8BHJ|1|0|U|12
8BHJ|1|0|A|13
8BHJ|1|0|A|14
8BHJ|1|0|G|15
*
8BHJ|1|0|U|525
8BHJ|1|0|A|526
8BHJ|1|0|C|527
8BHJ|1|0|A|528
8BHJ|1|0|A|529
8BHJ|1|0|G|530
8BHJ|1|0|C|531
8BHJ|1|0|A|532
8BHJ|1|0|G|533
*
8BHJ|1|0|C|560
8BHJ|1|0|G|561
8BHJ|1|0|U|562
8BHJ|1|0|A|563
8BHJ|1|0|C|564
*
8BHJ|1|0|G|577
8BHJ|1|0|G|578
8BHJ|1|0|G|579
*
8BHJ|1|0|C|1261
8BHJ|1|0|A|1262
*
8BHJ|1|0|U|2017
8BHJ|1|0|G|2018
8BHJ|1|0|A|2019
8BHJ|1|0|A|2020
8BHJ|1|0|C|2021
8BHJ|1|0|U|2022
8BHJ|1|0|C|2023
*
8BHJ|1|0|G|2040
8BHJ|1|0|U|2041
8BHJ|1|0|A|2042
8BHJ|1|0|C|2043
*
8BHJ|1|0|G|2625
8BHJ|1|0|C|2626
8BHJ|1|0|G|2627
8BHJ|1|0|C|2628
8BHJ|1|0|U|2629
8BHJ|1|0|G|2630
8BHJ|1|0|G|2631
*
8BHJ|1|0|C|2787
8BHJ|1|0|C|2788
8BHJ|1|0|C|2789
*
8BHJ|1|0|G|2894
8BHJ|1|0|G|2895

Current chains

Chain 0

23S rRNA RRLG-RRNA

Nearby chains

Chain B

50S ribosomal protein L3

Chain G

50S ribosomal protein L13

Chain N

50S ribosomal protein L20

Chain O

50S ribosomal protein L21

Chain P

50S ribosomal protein L22

Chain a

50S ribosomal protein L32