Loop J10_9BS0

3D structure

PDB id: _9BS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence: UUAGAAAG*UACAAGUAG*CGUGC*GAA*UA*UAUAGUA*UUAC*GCGCAG*CC*GA
Length: 48 nucleotides
Bulged bases: 9BS0|1|A|G|576, 9BS0|1|A|U|606
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

9BS0|1|A|U|8
9BS0|1|A|U|9
9BS0|1|A|A|10
9BS0|1|A|G|11
9BS0|1|A|A|12
9BS0|1|A|A|13
9BS0|1|A|A|14
9BS0|1|A|G|15
*
9BS0|1|A|U|571
9BS0|1|A|A|572
9BS0|1|A|C|573
9BS0|1|A|A|574
9BS0|1|A|A|575
9BS0|1|A|G|576
9BS0|1|A|U|577
9BS0|1|A|A|578
9BS0|1|A|G|579
*
9BS0|1|A|C|604
9BS0|1|A|G|605
9BS0|1|A|U|606
9BS0|1|A|G|607
9BS0|1|A|C|608
*
9BS0|1|A|G|621
9BS0|1|A|A|622
9BS0|1|A|A|623
*
9BS0|1|A|U|1301
9BS0|1|A|A|1302
*
9BS0|1|A|U|2046
9BS0|1|A|A|2047
9BS0|1|A|U|2048
9BS0|1|A|A|2049
9BS0|1|A|G|2050
9BS0|1|A|U|2051
9BS0|1|A|A|2052
*
9BS0|1|A|U|2069
9BS0|1|A|U|2070
9BS0|1|A|A|2071
9BS0|1|A|C|2072
*
9BS0|1|A|G|2654
9BS0|1|A|C|2655
9BS0|1|A|G|2656
9BS0|1|A|C|2657
9BS0|1|A|A|2658
9BS0|1|A|G|2659
*
9BS0|1|A|C|2817
9BS0|1|A|C|2818
*
9BS0|1|A|G|2918
9BS0|1|A|A|2919

Current chains

Chain A: 23S rRNA

Nearby chains

Chain D: Large ribosomal subunit protein uL3
Chain G: Large ribosomal subunit protein uL13
Chain L: Large ribosomal subunit protein bL20
Chain M: Large ribosomal subunit protein bL21
Chain N: Large ribosomal subunit protein uL22
Chain T: Large ribosomal subunit protein bL32

J10_9BS0_001