Loop J11_2AAR

3D structure

PDB id: _2AA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence: AUAGUAAG*UACAAGCAG*CGUGC*GAG*CA*UGAAUUG*CUAC*GCGCAG*CCAC*GGUAAG*CGAGGU
Length: 60 nucleotides
Bulged bases: 2AAR|1|0|C|537, 2AAR|1|0|C|541, 2AAR|1|0|U|571, 2AAR|1|0|U|2004, 2AAR|1|0|A|2770
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

2AAR|1|0|A|8
2AAR|1|0|U|9
2AAR|1|0|A|10
2AAR|1|0|G|11
2AAR|1|0|U|12
2AAR|1|0|A|13
2AAR|1|0|A|14
2AAR|1|0|G|15
*
2AAR|1|0|U|535
2AAR|1|0|A|536
2AAR|1|0|C|537
2AAR|1|0|A|538
2AAR|1|0|A|539
2AAR|1|0|G|540
2AAR|1|0|C|541
2AAR|1|0|A|542
2AAR|1|0|G|543
*
2AAR|1|0|C|569
2AAR|1|0|G|570
2AAR|1|0|U|571
2AAR|1|0|G|572
2AAR|1|0|C|573
*
2AAR|1|0|G|586
2AAR|1|0|A|587
2AAR|1|0|G|588
*
2AAR|1|0|C|1274
2AAR|1|0|A|1275
*
2AAR|1|0|U|2000
2AAR|1|0|G|2001
2AAR|1|0|A|2002
2AAR|1|0|A|2003
2AAR|1|0|U|2004
2AAR|1|0|U|2005
2AAR|1|0|G|2006
*
2AAR|1|0|C|2023
2AAR|1|0|U|2024
2AAR|1|0|A|2025
2AAR|1|0|C|2026
*
2AAR|1|0|G|2604
2AAR|1|0|C|2605
2AAR|1|0|G|2606
2AAR|1|0|C|2607
2AAR|1|0|A|2608
2AAR|1|0|G|2609
*
2AAR|1|0|C|2768
2AAR|1|0|C|2769
2AAR|1|0|A|2770
2AAR|1|0|C|2771
*
2AAR|1|0|G|2781
2AAR|1|0|G|2782
2AAR|1|0|U|2783
2AAR|1|0|A|2784
2AAR|1|0|A|2785
2AAR|1|0|G|2786
*
2AAR|1|0|C|2864
2AAR|1|0|G|2865
2AAR|1|0|A|2866
2AAR|1|0|G|2867
2AAR|1|0|G|2868
2AAR|1|0|U|2869

Current chains

Chain 0: 23S ribosomal RNA

Nearby chains

No other chains within 10Å

J11_2AAR_001