Loop J11_2O45

3D structure

PDB id: _2O4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence: AUAGUAAG*UACAAGCAGUC*GGCGUGC*GAG*CA*UGAAUUG*CUAC*GCGCAG*CCACU*AGGUAAG*CGAGGU
Length: 66 nucleotides
Bulged bases: 2O45|1|A|C|537, 2O45|1|A|C|541, 2O45|1|A|U|571, 2O45|1|A|U|2004, 2O45|1|A|A|2770, 2O45|1|A|G|2782, 2O45|1|A|G|2868
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

2O45|1|A|A|8
2O45|1|A|U|9
2O45|1|A|A|10
2O45|1|A|G|11
2O45|1|A|U|12
2O45|1|A|A|13
2O45|1|A|A|14
2O45|1|A|G|15
*
2O45|1|A|U|535
2O45|1|A|A|536
2O45|1|A|C|537
2O45|1|A|A|538
2O45|1|A|A|539
2O45|1|A|G|540
2O45|1|A|C|541
2O45|1|A|A|542
2O45|1|A|G|543
2O45|1|A|U|544
2O45|1|A|C|545
*
2O45|1|A|G|567
2O45|1|A|G|568
2O45|1|A|C|569
2O45|1|A|G|570
2O45|1|A|U|571
2O45|1|A|G|572
2O45|1|A|C|573
*
2O45|1|A|G|586
2O45|1|A|A|587
2O45|1|A|G|588
*
2O45|1|A|C|1274
2O45|1|A|A|1275
*
2O45|1|A|U|2000
2O45|1|A|G|2001
2O45|1|A|A|2002
2O45|1|A|A|2003
2O45|1|A|U|2004
2O45|1|A|U|2005
2O45|1|A|G|2006
*
2O45|1|A|C|2023
2O45|1|A|U|2024
2O45|1|A|A|2025
2O45|1|A|C|2026
*
2O45|1|A|G|2604
2O45|1|A|C|2605
2O45|1|A|G|2606
2O45|1|A|C|2607
2O45|1|A|A|2608
2O45|1|A|G|2609
*
2O45|1|A|C|2768
2O45|1|A|C|2769
2O45|1|A|A|2770
2O45|1|A|C|2771
2O45|1|A|U|2772
*
2O45|1|A|A|2780
2O45|1|A|G|2781
2O45|1|A|G|2782
2O45|1|A|U|2783
2O45|1|A|A|2784
2O45|1|A|A|2785
2O45|1|A|G|2786
*
2O45|1|A|C|2864
2O45|1|A|G|2865
2O45|1|A|A|2866
2O45|1|A|G|2867
2O45|1|A|G|2868
2O45|1|A|U|2869

Current chains

Chain A: 23S rRNA

Nearby chains

No other chains within 10Å

J11_2O45_001