J11_4V4A_002
3D structure
- PDB id
- _4V4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Experimental method
- Resolution
Loop
- Sequence
- AUAGUAAGG*UUACAAGCAG*CGUGCCU*AUGAG*CA*UGAAUUG*CUAC*GCGCAG*CCAC*GGUAAG*CGAGGU
- Length
- 66 nucleotides
- Bulged bases
- 4V4A|1|B0|A|14, 4V4A|1|B0|C|537, 4V4A|1|B0|G|540, 4V4A|1|B0|C|541, 4V4A|1|B0|A|542, 4V4A|1|B0|U|571, 4V4A|1|B0|U|2004, 4V4A|1|B0|A|2770, 4V4A|1|B0|A|2784
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4A|1|B0|A|8
4V4A|1|B0|U|9
4V4A|1|B0|A|10
4V4A|1|B0|G|11
4V4A|1|B0|U|12
4V4A|1|B0|A|13
4V4A|1|B0|A|14
4V4A|1|B0|G|15
4V4A|1|B0|G|16
*
4V4A|1|B0|U|534
4V4A|1|B0|U|535
4V4A|1|B0|A|536
4V4A|1|B0|C|537
4V4A|1|B0|A|538
4V4A|1|B0|A|539
4V4A|1|B0|G|540
4V4A|1|B0|C|541
4V4A|1|B0|A|542
4V4A|1|B0|G|543
*
4V4A|1|B0|C|569
4V4A|1|B0|G|570
4V4A|1|B0|U|571
4V4A|1|B0|G|572
4V4A|1|B0|C|573
4V4A|1|B0|C|574
4V4A|1|B0|U|575
*
4V4A|1|B0|A|584
4V4A|1|B0|U|585
4V4A|1|B0|G|586
4V4A|1|B0|A|587
4V4A|1|B0|G|588
*
4V4A|1|B0|C|1274
4V4A|1|B0|A|1275
*
4V4A|1|B0|U|2000
4V4A|1|B0|G|2001
4V4A|1|B0|A|2002
4V4A|1|B0|A|2003
4V4A|1|B0|U|2004
4V4A|1|B0|U|2005
4V4A|1|B0|G|2006
*
4V4A|1|B0|C|2023
4V4A|1|B0|U|2024
4V4A|1|B0|A|2025
4V4A|1|B0|C|2026
*
4V4A|1|B0|G|2604
4V4A|1|B0|C|2605
4V4A|1|B0|G|2606
4V4A|1|B0|C|2607
4V4A|1|B0|A|2608
4V4A|1|B0|G|2609
*
4V4A|1|B0|C|2768
4V4A|1|B0|C|2769
4V4A|1|B0|A|2770
4V4A|1|B0|C|2771
*
4V4A|1|B0|G|2781
4V4A|1|B0|G|2782
4V4A|1|B0|U|2783
4V4A|1|B0|A|2784
4V4A|1|B0|A|2785
4V4A|1|B0|G|2786
*
4V4A|1|B0|C|2864
4V4A|1|B0|G|2865
4V4A|1|B0|A|2866
4V4A|1|B0|G|2867
4V4A|1|B0|G|2868
4V4A|1|B0|U|2869
Current chains
- Chain B0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BB
- 50S ribosomal protein L3
- Chain BC
- 50S ribosomal protein L4
- Chain BH
- 50S ribosomal protein L13
- Chain BJ
- 50S ribosomal protein L15
- Chain BO
- 50S ribosomal protein L20
- Chain BP
- 50S ribosomal protein L21
- Chain BQ
- 50S ribosomal protein L22
- Chain BZ
- 50S ribosomal protein L32
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