J11_4V5B_002
3D structure
- PDB id
- _4V5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Experimental method
- Resolution
Loop
- Sequence
- CGACUAAG*UACAAGCAG*CGUAC*GGG*CAUAAGUAA*UGAAAUUGAACUC*GUAC*GCGCUG*CCUG*CC*GAGG
- Length
- 67 nucleotides
- Bulged bases
- 4V5B|1|AB|A|532, 4V5B|1|AB|U|562, 4V5B|1|AB|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5B|1|AB|C|8
4V5B|1|AB|G|9
4V5B|1|AB|A|10
4V5B|1|AB|C|11
4V5B|1|AB|U|12
4V5B|1|AB|A|13
4V5B|1|AB|A|14
4V5B|1|AB|G|15
*
4V5B|1|AB|U|525
4V5B|1|AB|A|526
4V5B|1|AB|C|527
4V5B|1|AB|A|528
4V5B|1|AB|A|529
4V5B|1|AB|G|530
4V5B|1|AB|C|531
4V5B|1|AB|A|532
4V5B|1|AB|G|533
*
4V5B|1|AB|C|560
4V5B|1|AB|G|561
4V5B|1|AB|U|562
4V5B|1|AB|A|563
4V5B|1|AB|C|564
*
4V5B|1|AB|G|577
4V5B|1|AB|G|578
4V5B|1|AB|G|579
*
4V5B|1|AB|C|1261
4V5B|1|AB|A|1262
4V5B|1|AB|U|1263
4V5B|1|AB|A|1264
4V5B|1|AB|A|1265
4V5B|1|AB|G|1266
4V5B|1|AB|U|1267
4V5B|1|AB|A|1268
4V5B|1|AB|A|1269
*
4V5B|1|AB|U|2011
4V5B|1|AB|G|2012
4V5B|1|AB|A|2013
4V5B|1|AB|A|2014
4V5B|1|AB|A|2015
4V5B|1|AB|U|2016
4V5B|1|AB|U|2017
4V5B|1|AB|G|2018
4V5B|1|AB|A|2019
4V5B|1|AB|A|2020
4V5B|1|AB|C|2021
4V5B|1|AB|U|2022
4V5B|1|AB|C|2023
*
4V5B|1|AB|G|2040
4V5B|1|AB|U|2041
4V5B|1|AB|A|2042
4V5B|1|AB|C|2043
*
4V5B|1|AB|G|2625
4V5B|1|AB|C|2626
4V5B|1|AB|G|2627
4V5B|1|AB|C|2628
4V5B|1|AB|U|2629
4V5B|1|AB|G|2630
*
4V5B|1|AB|C|2788
4V5B|1|AB|C|2789
4V5B|1|AB|U|2790
4V5B|1|AB|G|2791
*
4V5B|1|AB|C|2805
4V5B|1|AB|C|2806
*
4V5B|1|AB|G|2892
4V5B|1|AB|A|2893
4V5B|1|AB|G|2894
4V5B|1|AB|G|2895
Current chains
- Chain AB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain A0
- 50S RIBOSOMAL PROTEIN L32
- Chain AD
- 50S RIBOSOMAL PROTEIN L3
- Chain AE
- 50S RIBOSOMAL PROTEIN L4
- Chain AJ
- 50S RIBOSOMAL PROTEIN L13
- Chain AQ
- 50S RIBOSOMAL PROTEIN L20
- Chain AR
- 50S RIBOSOMAL PROTEIN L21
- Chain AS
- 50S RIBOSOMAL PROTEIN L22
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