Loop J11_6CZR

3D structure

PDB id: _6CZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence: GAUGGUAAG*UACAAGCAG*CGUGC*GAG*CA*UGAACUG*CUAC*GCGCAG*CCAC*GGUAAG*CGAGGUC
Length: 62 nucleotides
Bulged bases: 6CZR|1|1A|G|554, 6CZR|1|1A|U|584, 6CZR|1|1A|A|2802
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6CZR|1|1A|G|6
6CZR|1|1A|A|7
6CZR|1|1A|U|8
6CZR|1|1A|G|9
6CZR|1|1A|G|10
6CZR|1|1A|U|11
6CZR|1|1A|A|12
6CZR|1|1A|A|13
6CZR|1|1A|G|14
*
6CZR|1|1A|U|549
6CZR|1|1A|A|550
6CZR|1|1A|C|551
6CZR|1|1A|A|552
6CZR|1|1A|A|553
6CZR|1|1A|G|554
6CZR|1|1A|C|555
6CZR|1|1A|A|556
6CZR|1|1A|G|557
*
6CZR|1|1A|C|582
6CZR|1|1A|G|583
6CZR|1|1A|U|584
6CZR|1|1A|G|585
6CZR|1|1A|C|586
*
6CZR|1|1A|G|599
6CZR|1|1A|A|600
6CZR|1|1A|G|601
*
6CZR|1|1A|C|1306
6CZR|1|1A|A|1307
*
6CZR|1|1A|U|2038
6CZR|1|1A|G|2039
6CZR|1|1A|A|2040
6CZR|1|1A|A|2041
6CZR|1|1A|C|2042
6CZR|1|1A|U|2043
6CZR|1|1A|G|2044
*
6CZR|1|1A|C|2061
6CZR|1|1A|U|2062
6CZR|1|1A|A|2063
6CZR|1|1A|C|2064
*
6CZR|1|1A|G|2636
6CZR|1|1A|C|2637
6CZR|1|1A|G|2638
6CZR|1|1A|C|2639
6CZR|1|1A|A|2640
6CZR|1|1A|G|2641
*
6CZR|1|1A|C|2800
6CZR|1|1A|C|2801
6CZR|1|1A|A|2802
6CZR|1|1A|C|2803
*
6CZR|1|1A|G|2815
6CZR|1|1A|G|2816
6CZR|1|1A|U|2817
6CZR|1|1A|A|2818
6CZR|1|1A|A|2819
6CZR|1|1A|G|2820
*
6CZR|1|1A|C|2898
6CZR|1|1A|G|2899
6CZR|1|1A|A|2900
6CZR|1|1A|G|2901
6CZR|1|1A|G|2902
6CZR|1|1A|U|2903
6CZR|1|1A|C|2904

Current chains

Chain 1A: 23S Ribosomal RNA

Nearby chains

Chain 15: 50S ribosomal protein L32
Chain 1E: 50S ribosomal protein L3
Chain 1F: 50S ribosomal protein L4
Chain 1N: 50S ribosomal protein L13
Chain 1U: 50S ribosomal protein L20
Chain 1V: 50S ribosomal protein L21
Chain 1W: 50S ribosomal protein L22

J11_6CZR_001