3D structure

PDB id
_6WR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence
UUAUUAAG*UACAAGUAG*CGUGC*GAA*UG*CAUAGUA*UUAC*GCGUAG*CCAAC*GUUAUAAG*CGAAGA
Length
63 nucleotides
Bulged bases
6WRS|1|1|G|575, 6WRS|1|1|U|605
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WRS|1|1|U|8
6WRS|1|1|U|9
6WRS|1|1|A|10
6WRS|1|1|U|11
6WRS|1|1|U|12
6WRS|1|1|A|13
6WRS|1|1|A|14
6WRS|1|1|G|15
*
6WRS|1|1|U|570
6WRS|1|1|A|571
6WRS|1|1|C|572
6WRS|1|1|A|573
6WRS|1|1|A|574
6WRS|1|1|G|575
6WRS|1|1|U|576
6WRS|1|1|A|577
6WRS|1|1|G|578
*
6WRS|1|1|C|603
6WRS|1|1|G|604
6WRS|1|1|U|605
6WRS|1|1|G|606
6WRS|1|1|C|607
*
6WRS|1|1|G|620
6WRS|1|1|A|621
6WRS|1|1|A|622
*
6WRS|1|1|U|1299
6WRS|1|1|G|1300
*
6WRS|1|1|C|2044
6WRS|1|1|A|2045
6WRS|1|1|U|2046
6WRS|1|1|A|2047
6WRS|1|1|G|2048
6WRS|1|1|U|2049
6WRS|1|1|A|2050
*
6WRS|1|1|U|2067
6WRS|1|1|U|2068
6WRS|1|1|A|2069
6WRS|1|1|C|2070
*
6WRS|1|1|G|2652
6WRS|1|1|C|2653
6WRS|1|1|G|2654
6WRS|1|1|U|2655
6WRS|1|1|A|2656
6WRS|1|1|G|2657
*
6WRS|1|1|C|2815
6WRS|1|1|C|2816
6WRS|1|1|A|2817
6WRS|1|1|A|2818
6WRS|1|1|C|2819
*
6WRS|1|1|G|2824
6WRS|1|1|U|2825
6WRS|1|1|U|2826
6WRS|1|1|A|2827
6WRS|1|1|U|2828
6WRS|1|1|A|2829
6WRS|1|1|A|2830
6WRS|1|1|G|2831
*
6WRS|1|1|C|2909
6WRS|1|1|G|2910
6WRS|1|1|A|2911
6WRS|1|1|A|2912
6WRS|1|1|G|2913
6WRS|1|1|A|2914

Current chains

Chain 1
23S rRNA

Nearby chains

Chain C
50S ribosomal protein L20
Chain D
50S ribosomal protein L21
Chain E
uL22
Chain L
50S ribosomal protein L3
Chain N
50S ribosomal protein L32
Chain S
50S ribosomal protein L4
Chain V
50S ribosomal protein L13

Coloring options:

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