3D structure

PDB id
_6WR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Experimental method
Resolution

Loop

Sequence
UUAUUAAG*UACAAGUAG*CGUGC*GAA*UG*CAUAGUA*UUAC*GCGUAG*CCA*UAUAAG*CGAAGA
Length
59 nucleotides
Bulged bases
6WRU|1|1|G|575, 6WRU|1|1|U|605
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6WRU|1|1|U|8
6WRU|1|1|U|9
6WRU|1|1|A|10
6WRU|1|1|U|11
6WRU|1|1|U|12
6WRU|1|1|A|13
6WRU|1|1|A|14
6WRU|1|1|G|15
*
6WRU|1|1|U|570
6WRU|1|1|A|571
6WRU|1|1|C|572
6WRU|1|1|A|573
6WRU|1|1|A|574
6WRU|1|1|G|575
6WRU|1|1|U|576
6WRU|1|1|A|577
6WRU|1|1|G|578
*
6WRU|1|1|C|603
6WRU|1|1|G|604
6WRU|1|1|U|605
6WRU|1|1|G|606
6WRU|1|1|C|607
*
6WRU|1|1|G|620
6WRU|1|1|A|621
6WRU|1|1|A|622
*
6WRU|1|1|U|1299
6WRU|1|1|G|1300
*
6WRU|1|1|C|2044
6WRU|1|1|A|2045
6WRU|1|1|U|2046
6WRU|1|1|A|2047
6WRU|1|1|G|2048
6WRU|1|1|U|2049
6WRU|1|1|A|2050
*
6WRU|1|1|U|2067
6WRU|1|1|U|2068
6WRU|1|1|A|2069
6WRU|1|1|C|2070
*
6WRU|1|1|G|2652
6WRU|1|1|C|2653
6WRU|1|1|G|2654
6WRU|1|1|U|2655
6WRU|1|1|A|2656
6WRU|1|1|G|2657
*
6WRU|1|1|C|2815
6WRU|1|1|C|2816
6WRU|1|1|A|2817
*
6WRU|1|1|U|2826
6WRU|1|1|A|2827
6WRU|1|1|U|2828
6WRU|1|1|A|2829
6WRU|1|1|A|2830
6WRU|1|1|G|2831
*
6WRU|1|1|C|2909
6WRU|1|1|G|2910
6WRU|1|1|A|2911
6WRU|1|1|A|2912
6WRU|1|1|G|2913
6WRU|1|1|A|2914

Current chains

Chain 1
23S rRNA

Nearby chains

Chain C
50S ribosomal protein L20
Chain D
50S ribosomal protein L21
Chain E
50S ribosomal protein L22
Chain L
50S ribosomal protein L3
Chain N
50S ribosomal protein L32
Chain S
50S ribosomal protein L4
Chain V
50S ribosomal protein L13

Coloring options:

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