J3_10FZ_003
3D structure
- PDB id
- 10FZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.91 Å
Loop
- Sequence
- CGG*CUUG*CG
- Length
- 9 nucleotides
- Bulged bases
- 10FZ|1|A|U|653
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_10FZ_003 not in the Motif Atlas
- Geometric match to J3_8B0X_002
- Geometric discrepancy: 0.1272
- The information below is about J3_8B0X_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_01633.2
- Basepair signature
- cWW-F-cWW-cWW-F
- Number of instances in this motif group
- 5
Unit IDs
10FZ|1|A|C|586
10FZ|1|A|G|587
10FZ|1|A|G|588
*
10FZ|1|A|C|651
10FZ|1|A|U|652
10FZ|1|A|U|653
10FZ|1|A|G|654
*
10FZ|1|A|C|754
10FZ|1|A|G|755
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain H
- Small ribosomal subunit protein uS8
- Chain L
- Small ribosomal subunit protein uS12
- Chain O
- Small ribosomal subunit protein uS15
- Chain Q
- Small ribosomal subunit protein uS17
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