3D structure

PDB id
10FZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S ribosomal subunit from E. coli missing the gene encoding for the 16S rRNA 2'-O-methyltransferase RsmI
Experimental method
ELECTRON MICROSCOPY
Resolution
2.91 Å

Loop

Sequence
UAG*UACCGGUGG*CGG
Length
15 nucleotides
Bulged bases
10FZ|1|A|U|723
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

10FZ|1|A|U|672
10FZ|1|A|A|673
10FZ|1|A|G|674
*
10FZ|1|A|U|717
10FZ|1|A|A|718
10FZ|1|A|C|719
10FZ|1|A|C|720
10FZ|1|A|G|721
10FZ|1|A|G|722
10FZ|1|A|U|723
10FZ|1|A|G|724
10FZ|1|A|G|725
*
10FZ|1|A|C|732
10FZ|1|A|G|733
10FZ|1|A|G|734

Current chains

Chain A
16S rRNA

Nearby chains

Chain F
Small ribosomal subunit protein bS6, fully modified isoform
Chain K
Small ribosomal subunit protein uS11
Chain O
Small ribosomal subunit protein uS15
Chain R
Small ribosomal subunit protein bS18
Chain U
Small ribosomal subunit protein bS21

Coloring options:

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