J3_10QM_008

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

GGAUGUUG*CAUCAUUUAAAG*CAC

Length

23 nucleotides

Bulged bases

10QM|1|I|U|1061, 10QM|1|I|C|1079

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10QM|1|I|G|1055
10QM|1|I|G|1056
10QM|1|I|A|1057
10QM|1|I|U|1058
10QM|1|I|G|1059
10QM|1|I|U|1060
10QM|1|I|U|1061
10QM|1|I|G|1062
*
10QM|1|I|C|1076
10QM|1|I|A|1077
10QM|1|I|U|1078
10QM|1|I|C|1079
10QM|1|I|A|1080
10QM|1|I|U|1081
10QM|1|I|U|1082
10QM|1|I|U|1083
10QM|1|I|A|1084
10QM|1|I|A|1085
10QM|1|I|A|1086
10QM|1|I|G|1087
*
10QM|1|I|C|1102
10QM|1|I|A|1103
10QM|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain Q

Large ribosomal subunit protein uL11

Chain m

50S ribosomal protein L36