J3_10QM_020
3D structure
- PDB id
- 10QM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli 50S ribosomal subunit bound to compound 48a
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- GCCGUAG*CGC*GGAAC
- Length
- 15 nucleotides
- Bulged bases
- 10QM|1|J|U|14, 10QM|1|J|A|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
10QM|1|J|G|10
10QM|1|J|C|11
10QM|1|J|C|12
10QM|1|J|G|13
10QM|1|J|U|14
10QM|1|J|A|15
10QM|1|J|G|16
*
10QM|1|J|C|68
10QM|1|J|G|69
10QM|1|J|C|70
*
10QM|1|J|G|106
10QM|1|J|G|107
10QM|1|J|A|108
10QM|1|J|A|109
10QM|1|J|C|110
Current chains
- Chain J
- 5S ribosomal RNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain W
- Large ribosomal subunit protein uL18
- Chain d
- Large ribosomal subunit protein bL25
- Chain e
- 50S ribosomal protein L27
Coloring options: