J3_11AA_001
3D structure
- PDB id
- 11AA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast co-transcriptional pre-60S assembly intermediate Nop12 RNP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CAAA*UUUGGAG*CGAAG
- Length
- 16 nucleotides
- Bulged bases
- 11AA|1|1|G|156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11AA|1|1|C|113
11AA|1|1|A|114
11AA|1|1|A|115
11AA|1|1|A|116
*
11AA|1|1|U|152
11AA|1|1|U|153
11AA|1|1|U|154
11AA|1|1|G|155
11AA|1|1|G|156
11AA|1|1|A|157
11AA|1|1|G|158
*
11AA|1|1|C|263
11AA|1|1|G|264
11AA|1|1|A|265
11AA|1|1|A|266
11AA|1|1|G|267
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain G
- 60S ribosomal protein L8-A
- Chain L
- 60S ribosomal protein L13-A
- Chain N
- 60S ribosomal protein L15-A
- Chain i
- 60S ribosomal protein L36-A
- Chain p
- ATP-dependent RNA helicase HAS1
- Chain s
- Ribosome biogenesis protein ERB1
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