J3_11DG_010
3D structure
- PDB id
- 11DG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved Vibrio cholerae 16S rRNA (VC-S4.4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUCGUCAG*CGCAACCC*GGACGACGUC
- Length
- 26 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11DG|1|A|G|1061
11DG|1|A|U|1062
11DG|1|A|C|1063
11DG|1|A|G|1064
11DG|1|A|U|1065
11DG|1|A|C|1066
11DG|1|A|A|1067
11DG|1|A|G|1068
*
11DG|1|A|C|1107
11DG|1|A|G|1108
11DG|1|A|C|1109
11DG|1|A|A|1110
11DG|1|A|A|1111
11DG|1|A|C|1112
11DG|1|A|C|1113
11DG|1|A|C|1114
*
11DG|1|A|G|1187
11DG|1|A|G|1188
11DG|1|A|A|1189
11DG|1|A|C|1190
11DG|1|A|G|1191
11DG|1|A|A|1192
11DG|1|A|C|1193
11DG|1|A|G|1194
11DG|1|A|U|1195
11DG|1|A|C|1196
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain B
- Small ribosomal subunit protein uS2
- Chain C
- 30S ribosomal protein S3
- Chain E
- Small ribosomal subunit protein uS5
- Chain G
- Small ribosomal subunit protein uS7
- Chain I
- Small ribosomal subunit protein uS9
- Chain J
- Small ribosomal subunit protein uS10
- Chain N
- Small ribosomal subunit protein uS14
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