J3_11DG_027
3D structure
- PDB id
- 11DG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved Vibrio cholerae 16S rRNA (VC-S4.4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAUCCUGG*CCAAGGGUA*UUUAAAG
- Length
- 24 nucleotides
- Bulged bases
- 11DG|1|a|A|2518
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11DG|1|a|C|2517
11DG|1|a|A|2518
11DG|1|a|U|2519
11DG|1|a|C|2520
11DG|1|a|C|2521
11DG|1|a|U|2522
11DG|1|a|G|2523
11DG|1|a|G|2524
*
11DG|1|a|C|2539
11DG|1|a|C|2540
11DG|1|a|A|2541
11DG|1|a|A|2542
11DG|1|a|G|2543
11DG|1|a|G|2544
11DG|1|a|G|2545
11DG|1|a|U|2546
11DG|1|a|A|2547
*
11DG|1|a|U|2561
11DG|1|a|U|2562
11DG|1|a|U|2563
11DG|1|a|A|2564
11DG|1|a|A|2565
11DG|1|a|A|2566
11DG|1|a|G|2567
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL36A
- Chain d
- 50S ribosomal protein L3
- Chain g
- Large ribosomal subunit protein uL6
- Chain i
- Large ribosomal subunit protein uL13
- Chain j
- Large ribosomal subunit protein uL14
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