J3_11FV_023

3D structure

PDB id

11FV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGA*UUUAAAGAAAG*CUCAC

Length

19 nucleotides

Bulged bases

11FV|1|I|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11FV|1|I|G|1055
11FV|1|I|G|1056
11FV|1|I|A|1057
*
11FV|1|I|U|1081
11FV|1|I|U|1082
11FV|1|I|U|1083
11FV|1|I|A|1084
11FV|1|I|A|1085
11FV|1|I|A|1086
11FV|1|I|G|1087
11FV|1|I|A|1088
11FV|1|I|A|1089
11FV|1|I|A|1090
11FV|1|I|G|1091
*
11FV|1|I|C|1100
11FV|1|I|U|1101
11FV|1|I|C|1102
11FV|1|I|A|1103
11FV|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain m

Large ribosomal subunit protein bL36A