J3_11HG_012
3D structure
- PDB id
- 11HG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,CCDC124,and LARP1,40S-head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGGCAUGC*GAGGGACAAG*CCCGAGAUUG
- Length
- 29 nucleotides
- Bulged bases
- 11HG|1|18|U|1397, 11HG|1|18|U|1477
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11HG|1|18|C|1391
11HG|1|18|U|1392
11HG|1|18|G|1393
11HG|1|18|G|1394
11HG|1|18|C|1395
11HG|1|18|A|1396
11HG|1|18|U|1397
11HG|1|18|G|1398
11HG|1|18|C|1399
*
11HG|1|18|G|1447
11HG|1|18|A|1448
11HG|1|18|G|1449
11HG|1|18|G|1450
11HG|1|18|G|1451
11HG|1|18|A|1452
11HG|1|18|C|1453
11HG|1|18|A|1454
11HG|1|18|A|1455
11HG|1|18|G|1456
*
11HG|1|18|C|1470
11HG|1|18|C|1471
11HG|1|18|C|1472
11HG|1|18|G|1473
11HG|1|18|A|1474
11HG|1|18|G|1475
11HG|1|18|A|1476
11HG|1|18|U|1477
11HG|1|18|U|1478
11HG|1|18|G|1479
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain AA
- Receptor of activated protein C kinase 1
- Chain II
- Small ribosomal subunit protein uS9
- Chain OO
- 40S ribosomal protein S20
- Chain RS
- 40S ribosomal protein S17
- Chain S3
- Small ribosomal subunit protein uS3
- Chain S5
- Small ribosomal subunit protein uS7
- Chain WW
- 40S ribosomal protein S28
- Chain XX
- 40S ribosomal protein S29
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