J3_11KH_004
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUG*UUCCG*CAAAG
- Length
- 13 nucleotides
- Bulged bases
- 11KH|1|18|C|1138, 11KH|1|18|A|1150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11KH|1|18|C|1094
11KH|1|18|U|1095
11KH|1|18|G|1096
*
11KH|1|18|U|1136
11KH|1|18|U|1137
11KH|1|18|C|1138
11KH|1|18|C|1139
11KH|1|18|G|1140
*
11KH|1|18|C|1147
11KH|1|18|A|1148
11KH|1|18|A|1149
11KH|1|18|A|1150
11KH|1|18|G|1151
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain BB
- Small ribosomal subunit protein uS2
- Chain PP
- eS21
- Chain UU
- eS26
- Chain VV
- 40S ribosomal protein S27
- Chain WX
- 40S ribosomal protein S15a
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