J3_11KH_017
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GCGCAGUC*GUGCG*CGAUGUC
- Length
- 20 nucleotides
- Bulged bases
- 11KH|1|28|C|449, 11KH|1|28|C|704
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
11KH|1|28|G|448
11KH|1|28|C|449
11KH|1|28|G|450
11KH|1|28|C|451
11KH|1|28|A|452
11KH|1|28|G|453
11KH|1|28|U|454
11KH|1|28|C|455
*
11KH|1|28|G|701
11KH|1|28|U|702
11KH|1|28|G|703
11KH|1|28|C|704
11KH|1|28|G|705
*
11KH|1|28|C|1292
11KH|1|28|G|1293
11KH|1|28|A|1294
11KH|1|28|U|1295
11KH|1|28|G|1296
11KH|1|28|U|1297
11KH|1|28|C|1298
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 32
- Large ribosomal subunit protein eL32
- Chain L6
- large ribosomal subunit protein eL6
- Chain ee
- Large ribosomal subunit protein eL33
- Chain gg
- 60S ribosomal protein L28
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