J3_1FKA_001
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GUGCGACAUGC*GCAGUUAGGAAUCUUC*GAGCGAC
- Length
- 34 nucleotides
- Bulged bases
- 1FKA|1|A|A|393
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1FKA|1|A|G|45
1FKA|1|A|U|46
1FKA|1|A|G|47
1FKA|1|A|C|48
1FKA|1|A|G|53
1FKA|1|A|A|54
1FKA|1|A|C|55
1FKA|1|A|A|56
1FKA|1|A|U|57
1FKA|1|A|G|58
1FKA|1|A|C|59
*
1FKA|1|A|G|350
1FKA|1|A|C|351
1FKA|1|A|A|352
1FKA|1|A|G|353
1FKA|1|A|U|354
1FKA|1|A|U|355
1FKA|1|A|A|356
1FKA|1|A|G|357
1FKA|1|A|G|358
1FKA|1|A|A|359
1FKA|1|A|A|360
1FKA|1|A|U|361
1FKA|1|A|C|362
1FKA|1|A|U|363
1FKA|1|A|U|364
1FKA|1|A|C|365
*
1FKA|1|A|G|388
1FKA|1|A|A|389
1FKA|1|A|G|390
1FKA|1|A|C|391
1FKA|1|A|G|392
1FKA|1|A|A|393
1FKA|1|A|C|394
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain L
- 30S RIBOSOMAL PROTEIN S12
- Chain P
- 30S RIBOSOMAL PROTEIN S16
- Chain T
- 30S RIBOSOMAL PROTEIN S20
Coloring options: