J3_1FKA_005
3D structure
- PDB id
- 1FKA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CGC*GGGC*GAGGAAGAAGGA*G
- Length
- 20 nucleotides
- Bulged bases
- 1FKA|1|A|A|1160, 1FKA|1|A|A|1160, 1FKA|1|A|G|1161, 1FKA|1|A|G|1162, 1FKA|1|A|A|1163
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
1FKA|1|A|C|1097
1FKA|1|A|G|1098
1FKA|1|A|C|1099
*
1FKA|1|A|G|1136
1FKA|1|A|G|1137
1FKA|1|A|G|1141
1FKA|1|A|C|1142
*
1FKA|1|A|G|1155
1FKA|1|A|A|1156
1FKA|1|A|G|1157
1FKA|1|A|G|1158
1FKA|1|A|A|1159
1FKA|1|A|A|1160
1FKA|1|A|G|1164
1FKA|1|A|A|1159
1FKA|1|A|A|1160
1FKA|1|A|G|1161
1FKA|1|A|G|1162
1FKA|1|A|A|1163
*
1FKA|1|A|G|1164
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain I
- 30S RIBOSOMAL PROTEIN S9
Coloring options: