J3_1FKA_006

3D structure

PDB id

1FKA (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF FUNCTIONALLY ACTIVATED SMALL RIBOSOMAL SUBUNIT AT 3.3 A RESOLUTION

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGG*CUAGAC*GUGACG

Length

15 nucleotides

Bulged bases

1FKA|1|A|A|637, 1FKA|1|A|A|737, 1FKA|1|A|C|738

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1FKA|1|A|C|570
1FKA|1|A|G|571
1FKA|1|A|G|572
*
1FKA|1|A|C|635
1FKA|1|A|U|636
1FKA|1|A|A|637
1FKA|1|A|G|638
1FKA|1|A|A|639
1FKA|1|A|C|640
*
1FKA|1|A|G|734
1FKA|1|A|U|735
1FKA|1|A|G|736
1FKA|1|A|A|737
1FKA|1|A|C|738
1FKA|1|A|G|739

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains

Chain H

30S RIBOSOMAL PROTEIN S8

Chain O

30S RIBOSOMAL PROTEIN S15

Chain Q

30S RIBOSOMAL PROTEIN S17