J3_1GRZ_001

3D structure

PDB id

1GRZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A PREORGANIZED ACTIVE SITE IN THE CRYSTAL STRUCTURE OF THE TETRAHYMENA RIBOZYME

Experimental method

X-RAY DIFFRACTION

Resolution

5 Å

Loop

Sequence

CAAGU*AUGGC*GGUAUG

Length

16 nucleotides

Bulged bases

1GRZ|1|A|U|179

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1GRZ|1|A|C|138
1GRZ|1|A|A|139
1GRZ|1|A|A|140
1GRZ|1|A|G|141
1GRZ|1|A|U|142
*
1GRZ|1|A|A|161
1GRZ|1|A|U|162
1GRZ|1|A|G|163
1GRZ|1|A|G|164
1GRZ|1|A|C|165
*
1GRZ|1|A|G|175
1GRZ|1|A|G|176
1GRZ|1|A|U|177
1GRZ|1|A|A|178
1GRZ|1|A|U|179
1GRZ|1|A|G|180

Current chains

Chain A

LSU R-RNA GROUP I INTRON

Nearby chains