J3_1HNW_016

3D structure

PDB id

1HNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

AGGGAACCC*GGGGUGC*GAGCCCU

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1HNW|1|A|A|1001
1HNW|1|A|G|1002
1HNW|1|A|G|1003
1HNW|1|A|G|1003|||A
1HNW|1|A|A|1004
1HNW|1|A|A|1005
1HNW|1|A|C|1006
1HNW|1|A|C|1007
1HNW|1|A|C|1008
*
1HNW|1|A|G|1021
1HNW|1|A|G|1022
1HNW|1|A|G|1023
1HNW|1|A|G|1024
1HNW|1|A|U|1025
1HNW|1|A|G|1026
1HNW|1|A|C|1027
*
1HNW|1|A|G|1034
1HNW|1|A|A|1035
1HNW|1|A|G|1036
1HNW|1|A|C|1037
1HNW|1|A|C|1038
1HNW|1|A|C|1039
1HNW|1|A|U|1040

Current chains

Chain A

16S RIBOSOMAL RNA

Nearby chains