J3_1I94_017
3D structure
- PDB id
- 1I94 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURES OF THE SMALL RIBOSOMAL SUBUNIT WITH TETRACYCLINE, EDEINE AND IF3
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UG*UGUUG*CGCAA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J3_1I94_017 not in the Motif Atlas
- Homologous match to J3_6CZR_024
- Geometric discrepancy: 0.1531
- The information below is about J3_6CZR_024
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J3_04260.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
1I94|1|A|U|1055
1I94|1|A|G|1056
*
1I94|1|A|U|1065
1I94|1|A|G|1066
1I94|1|A|U|1067
1I94|1|A|U|1068
1I94|1|A|G|1069
*
1I94|1|A|C|1080
1I94|1|A|G|1081
1I94|1|A|C|1082
1I94|1|A|A|1083
1I94|1|A|A|1084
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain B
- 30S RIBOSOMAL PROTEIN S2
- Chain E
- 30S RIBOSOMAL PROTEIN S5
Coloring options: