3D structure

PDB id
1I97 (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
Experimental method
X-RAY DIFFRACTION
Resolution
4.5 Å

Loop

Sequence
GGCGGCC*GGCUAGA*UGACGCU
Length
21 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

1I97|1|A|G|567
1I97|1|A|G|568
1I97|1|A|C|569
1I97|1|A|G|570
1I97|1|A|G|571
1I97|1|A|C|572
1I97|1|A|C|573
*
1I97|1|A|G|632
1I97|1|A|G|633
1I97|1|A|C|634
1I97|1|A|U|635
1I97|1|A|A|636
1I97|1|A|G|637
1I97|1|A|A|638
*
1I97|1|A|U|734
1I97|1|A|G|735
1I97|1|A|A|736
1I97|1|A|C|737
1I97|1|A|G|738
1I97|1|A|C|739
1I97|1|A|U|740

Current chains

Chain A
16S RRNA

Nearby chains

Chain H
30S RIBOSOMAL PROTEIN S8
Chain L
30S RIBOSOMAL PROTEIN S12
Chain O
30S RIBOSOMAL PROTEIN S15
Chain Q
30S RIBOSOMAL PROTEIN S17

Coloring options:

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