J3_1I97_010

3D structure

PDB id

1I97 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

GCACAAGC*GCUAGUAAU*GUGAAUACGUUCCC

Length

31 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

1I97|1|A|G|910
1I97|1|A|C|911
1I97|1|A|A|912
1I97|1|A|C|913
1I97|1|A|A|914
1I97|1|A|A|915
1I97|1|A|G|916
1I97|1|A|C|917
*
1I97|1|A|G|1324
1I97|1|A|C|1325
1I97|1|A|U|1326
1I97|1|A|A|1327
1I97|1|A|G|1328
1I97|1|A|U|1329
1I97|1|A|A|1330
1I97|1|A|A|1331
1I97|1|A|U|1332
*
1I97|1|A|G|1353
1I97|1|A|U|1354
1I97|1|A|G|1355
1I97|1|A|A|1356
1I97|1|A|A|1357
1I97|1|A|U|1358
1I97|1|A|A|1359
1I97|1|A|C|1360
1I97|1|A|G|1361
1I97|1|A|U|1362
1I97|1|A|U|1363
1I97|1|A|C|1364
1I97|1|A|C|1365
1I97|1|A|C|1366

Current chains

Chain A

16S RRNA

Nearby chains

Chain G

30S RIBOSOMAL PROTEIN S7

Chain I

30S RIBOSOMAL PROTEIN S9